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Regular version of the site

Projects

Projects of laboratory research assistants

Elen Tevanyan

Postgraduate

The role of secondary DNA structures in chromatin reorganization. Construction of machine learning models for finding patterns of interconnected arrangement of secondary structures of DNA and other functional genomic elements.
Anton Zaikin

Postgraduate

The role of secondary structures in promoter regions. The role of secondary structures in transposons. Building machine learning models for recognizing secondary DNA structures.
Жиенбаева Молдир

2nd year student of the ADBM master program

The project "Pan-genomes of bacilli". Construction of the orthological series of Bacillaceae. Analysis of pan-genomes for the B. cereus and B. subtilis groups. Determination of the minimum number of orthologs, the minimum nucleus of genes, the extended pool of orthologs, and genes specific for each type of bacteria. The evolution of intergenic regions.
Тихонова Екатерина Александровна

Студентка 2 курса магистерской программы АДБМ

The project "Pan-genomes of bacilli". Construction of the orthological series of Bacillaceae. Analysis of pan-genomes for the B. cereus and B. subtilis groups. Determination of the minimum number of orthologs, the minimum nucleus of genes, the extended pool of orthologs, and genes specific for each type of bacteria. The evolution of intergenic regions.
Щербаков Александр Сергеевич

2nd year student of the ADBM master program

Разработка алгоритмов и программ для выявления и визуализации консервативных структурных особенностей комплексов в пределах семейств и подсемейств базы данных NPIDB.
Бутенко Николай Андреевич

2nd year student of the ADBM master program

Development of algorithms and programs for the identification and visualization of conservative structural features of the complexes within the families and subfamilies of the NPIDB database.
Otabek Oybekovich Matkarimov Otabek

1st year student of the master program "Data Science"

Development of a program for searching patterns of correlations between the densities of two functional annotations of the genome. Testing a program to find a correlation between densities of secondary DNA structures and epigenetic markers. Development and testing of patterns search algorithms between functional genomic annotations.
Поливода Денис Эдуардович

1st year student of the master program MIEM

Development of a program for searching patterns of correlations between the densities of two functional annotations of the genome. Testing a program to find a correlation between densities of secondary DNA structures and epigenetic markers. Development and testing of patterns search algorithms between functional genomic annotations.
Иовлева Анастасия Алексеевна

Student 4 year undergraduate FCS

Identification of the orthologic series of bacterial transcription factors and the study of the size distribution of families.

Internship in the laboratory on the project "Abstract genomes secondary structures of DNA" October-December 2018

Interns:

FCS

2nd year

Veprentsev Ivan "Abstract of the human genome by triplexes"

3nd year

Alexander Sokolov "Abstract of the genome of Aradopsis thailana stem-loop structures"

Gleb Mezentsev "Abstract of the Danio rerio fish genome by stem-loop structures"

4th year

Glazkova Ekaterina "Abstract of the chimpanzee genome by stem-loop structures"

 

Business Informatics

3nd year

Anna Savka "Annotation of the orangutan genome by stem-loop structures"

Evsyukova Arina "Abstract of the Gorilla genome by stem-loop structures"

Summer Internship

Interns:

FCS

1st year

Veprentsev Ivan "Abstract of the human genome by triplexes"

Aleikin Sergey "Abstract of the Human Genome by Z-DNA Plots"

For internships in the bioinformatics laboratory, please contact the manager Zherebtsova Ksenia


 

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